CDS

Accession Number TCMCG014C10507
gbkey CDS
Protein Id GAY42197.1
Location complement(join(1520144..1520596,1521150..1521483,1522079..1524691,1525328..1527741,1527897..1528241,1528331..1528480,1528557..1528664,1528869..1528922,1529051..1529119,1529573..1529678,1529892..1529951,1530216..1530343))
Organism Citrus unshiu
locus_tag CUMW_064940

Protein

Length 2277aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB5882, BioSample:SAMD00083908, Sequence Read Archive:DRR142810, DRR142811, DRR142812, DRR142818,, DRR142819, DRR142820, DRR142821, DRR142822
db_source BDQV01000015.1
Definition hypothetical protein CUMW_064940 [Citrus unshiu]
Locus_tag CUMW_064940

EGGNOG-MAPPER Annotation

COG_category K
Description mediator of RNA polymerase II transcription subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0040034        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090213        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAAAGGTATCATCCTACCAGCTGCACTAGTGCAGTAAATAACAGTGCAATAAGTGGTACGTCAGCTAGGGATGCTACTCGAGCTGATTCTTCTTCATTGCCTGCGAACTTCTCTATAAATTCTCGGAGGTCAACTCAGCTAACGCCATACAAGTTGAAGTGTGACAAAGAATCTCTGAATTCACGACTTGGGCCGCCTGATTTTCACCCGCAAACTCCCAATTGCCCCGAGGAGACTCTCACGAGAGAATATGTGCAGAATGGATACAAGGAGACCGTCGAAGGACTTGAGGAAGTCAGAGAGATATCACTGACTCAAGCTCAAACTTTTAATAAGCCTGTTGTACTGAAGTGCAGAGAGGCAATCAGAAAATGCCTCAGGGCAATTAATGAATCACGTGCCCAGAAGCGTAAGGCTGGTCAAGTTTATGGCGTGCCTCTTTCTGATTCACTATTAACTAAGCCTGGTGTCTTTCCTGAACAAAGGCCATGTGGTGAAGAATTCAGGAAGAAATGGATTGAGGGTTTATCACAGCAGCATAAACGATTACGTTCTTTGGCCGATCATGTTCCTCATGGGTATAGGAAAAGATCCCTGTTTGAAGTTCTTATCCGAAATAATGTCCCGTTGCTGAGAGCAACTTGGTTCATAAAAGTAACTTATCTTAATCAGGTTCGTCATGGTTCTGCAAATTCTTTATCTGGGGCACAGGACAAAATTCAGCTTTCTCGCACTGAGATCTGGACAAAAGATGTCATTGATTATTTACAACACCTCCTGGATGAATTCTTTTCGAGAAATAATTCTCATTCTACTCAATACAGCAGAGATCGGTCCCCACAAACGCTTTATACCGGGTCCCCTCAGCAAAGGAGTGATCCAGCAGCAGTCATTAATAGCGAGGAGCCTTCCCTCCATTTCAAATGGTGGTATATGGTGCGGCTTGTCCAATGGCACCTTGCAGAAGGGCTCCTTCTTCCTTCTTACATCATCGAGTGGGTTCTAAATCAACTAAAGGATAAAGAATTGCTCGAGATTTTGCAGCTGGTATTACCTATCATATATGGTGTTTTAGAAACTGTTGTTTCATCCCAAACATATGTACGCTCTCTAGTGGGGATAGCAACTCATTTTATTCGCGAACCTTCTCCGGGAGGATCCGATCTTGTAGATAATTCTCGGAGGGCATACACAATTTCTGCTCTGGCTGAGATGCTTCGATATTTGATACTGGCAGTACCTGATACATTTGTTGCTTTGGATTGTTTCCCTTTACCATCCTGTGTTGTATCTTATGCTGCAAATGATGGGAATTTTGTGTCAAAGGCATCTGAAGATGTAGGAAAGATGAAGAATTACTCAACTGACGCTATCTGTGTGTTTAGGGGGAAAGCGGTTGATGCACAATATCAATCCTTGTCCTTTGATAATGTTATTTCAGCCATTCAGAGACGTGCAGATAATCTTGCAAAGGATGCAAGCCCTGGCTATCCAGGTCACAGCGTGGCTAAAGCTGTGCAGGCCTTGGACAAAGCTCTTTTACAAGGAGATATTAGAGAGGCTTACAAACATCTCTTTGAAGATCTTTGTGATGCAGCTCTTGATGAAAGTTGGATTGCGGAAGTTAGTCCTTGCTTAAGATCATCTCTGAAGTGGATTGGAACTGTAAGCTTGTCGTCTGTTTGCTCAGTATTCTTTATTTGTGAATGGGCAACATGTGATTTCCGGGATTTTCGAACTGTTCCTCCCCATGGCATGAAGTTCACAGGTAGAAAAGATTTCTCACAGATATATGTTGCTATTCGGCTTTTGAAGCAAAAGATAAGAGATTTGCACACTCCGCCTCGTCGCAAATCTGAGAGTACCCTTGGTATTATTGATAACCTTGCTAAGGGTTCCCGTCAACGGAATAATTATGCTAATAGGAATTTTCAGGGAAATGGCTATGAAATCAAAAACAACGCCAATCGTTTAGATGGATTGAGAATAAATTCGTCTGACATATTTGAAACTCCGGGACCTTTGCATGATATCATAGTTTGCTGGATTGATCAACATGAGATTCACAAAAGAGAGGGTGTCAAGCGTGTGCAACATTTCATTATGGAACTTGTACGGGCAGGCATATTTTATCCTCAGGCATATGTGAGGCAGCTGATGGTTAGTGGAATTTTGGACATGAATGGTCTTGACCTGAACAGGAGGAGGAGACACCATAGAATTTTAAAGGTGCTTCCAGGGCTGTTTCTTCGTGTTGCTTTGGAAGAAGCAAGGATTGCTGAAGGGTCTCAACTTTCAGAGGCCATACATGTTTACTCAAATGAGCGCCGCCTTGTCCTTCATGAGCTTCTTTTTGATCAATCTATCTATGTAAATGTAGCAGCTCAGAATCAAAAGCGTCACATGGCTGGCGGAAGAGATGGTGCTTCTCCTTCTTTAGCTGATCAGTGGAAAACCATCCAGCCAACTACTGGTATATCATCTGGTAGAAGTGGGAAAAGTGATGCTGACATTGAAGAACTGAAGGCCTCCATTGCAGTGATACTGCAGCTCCCAAGCTCCTCTGCTACATCTGCAGACTCAGGGTTGGATGAATCTCAAGGTAGTGTTAAGAGGTCTCTGGGGGCAGTAAGTAGTAAGATGGATCTTTCAGAAGGTACACCTGGGTGTGAAGATTGTAAACGGGTTAAGAGGCAAAAGTTATGCGAGGATAGAAGTTCAGTTCTGCAAATTCCTTCACCGATTCATTCTGATGATGAAGATTTGTGGTGGGTGAGAAAGGGACCTAAACCCTTAGAGTCTTACAAAGCTGATCCACCACTTAAGTCAACCAAGCAGGTCTCTAGGGGTAGGCAAAAGACTGTCCGTAGAACTCAAAGTCTTGCTCAGTTAGCAGCTGCTAGGATTGAAGGTAGCCAGGGAGCATCAACAAGTCATGTATGTGATAACAAAGGAAGCTGCCCTCACCATAAAACTGGAGTGGAAGGAGAAACGCTTAAGTCAATGGATGGTGTCAGGACCGCCTGTTATGGAGATATTGTTTCGATAGGAAAGGCTTTAAAGAAACTCCAATATGTGGAGAAGAGGACAGTCACAGTTTGGTTGATATCTATAGCTAGGCAGCATATTGAAGAAGCTGAGAAGACTGCTGCAAAGGTTGGCCAATTTAATAGGTCTTTTGTTCCAGTTGAAGGTAGGATTTCTGGGCGCTGGAGGCTTAGTGAGGATGAGTTATCTGCTATACTATATTTCATGGATGTTTGTGATGATTTAGTTTCTGCTACCAAATTTCTTCTTTGGTTGCTGCCAAAGGTTCTAAATAGTCCTAGTTCAACAATTAATAGTGGTAGGAACATTCTGATGCTGTCAAGGAATGCTGAAAACCATGCATGCGGAGTGGGAGAGGCATTTTTGTTATCGTCCCTACGAAGGTATGAAAATATAATTATTGCAACAGATCTAATTCCCGAGGCCTTATCTGCTACAATGCATCGTGCTGCACAAGTTATGGCCTCCAATGGCAGAGTTTCAGGTTCAGCAGCCTATGGTTATGCCCGATATCTATTAAAGAAATACGGCAATATGGCTAGTGTCATTGAATGGGAGAAGAATTTCAAGGCAACTTGTGACAAGAGACTTCTTTCTGAGCTTGAATCTGGAAGATCACTCGATGGAGAGTTGGGACTTCCACTTGGAGTTCCAGCAGGGATCGAGGATCCTGATGATTATTTGCGTCAAAAGATAAGTGGTGGTCAATTGTCCAGAGTGGGCTTGAGCATGAGAGATGTAGTGCATAGGCACATGGAGGAGGCCTTCCATTATTTTTATGATAAAGAGAGAAAGCTATTTGCAGCTGGTTCACCAAGAAATCCTGCTATAGATAAATCAGACGATGAATCTCAGATTGCTCAACAAATAATTATTGGATTGATGGACTGCTTCAGGCAGACTGGTGGTGCTGCTCAAGAAGGGGATCCATCTTTGTTGTCATCTGCGGTTTCCGCCATTGTTGGAAATGTAATACCAACTATGGTGAAAATTCATGATTTTACAGCTGGCAGTAATTATCAAAATTATGCGTCTACCACAGGTTCCTTAAGCTTTGCCAGGCGCATTTTGCGTATATATATAACTTGCTTATGCTTGCTGAAGGAAGCACTTGGAGAGCGTCAGAGCCGGGTGTTTGAGATAGCTCTTGCAACAGAAGCTTCTTGTGCTCTTGCTCGAGTTTTTACTCCTGGAAAGGCTGCTCGGAGTCAGTTTCAGTCATCTCCTGAAGCCCATGATCCTAATGCAAATATGTCAAATGATATATTAAACAGCTCCTCAAAAGTAGCCTCTGGGAGAACTTCAAAAGTCACAGCTGCTATTTCTGCACTCGTTGTTGGTGCTGTTCTTCACGGCGTTACCAGCCTGGAAAGAATGGTTACTGTCTTTAGATTAAAGGAAGGACTGGATGTGATTCAGTTTGTGAGGAGTACAAAATCCAATTCAAATGGAAGTGCCCGTTCAATTGGGACTTTTAAACTGGACAACTCAATTGAAGTTCACGTGCATTGGTTTAGGCTACTTGTTGGGAACTGTAGAACTGTTTCTGATGGACTAGTTGTGGAATTCTTGGGCGAACCATCTATAGTAGCTCTTTCAAGAATGCAGCGAATGCTTCCTCTTAGCTTAGTCTTTCCACCTGCATATTTAATATTTGCCTTTGTTCTGTGGAGGCCATTCATTCTGAACAATAGCCTTGCAGTCCGTGAAGATATCCATCAAATGTATCAGTCTTTAACAATGGCCATCAATGATGCCATAAGACACCTGCCTTTCAGGGATGTATGTCTGAGAGACTGTCAGGGTTTCTACAATCTTGTGACTGCAGATTCCACTGATGCTGAGTTTGCAGCAATGCTGGAACTGAATGGTCTGGACTTGCAGTTGAAATCGATGGCATTTGTTCCTCTTCGTGCAAGGCTTTTTTTAAATGCTATCATTGATTGTAAAATGCCATCCTCCCTTTTTAAACCAGAGGACTTTAATCGAGTTTCTGGACATACTGAATCCAAAAGTCATCGTGCAGAGAATGAAGCAAAGCTTTTGGATAAGCTTGTGCATGTACTGGATTCCCTGCAACCGGCAAAGTTTCATTGGCAGTGGGTTGAGCTCAGGCTTCTTTTGAACGAACAAGCCCTGATTGATAGACTGGAGAACCATGAAATGTCCTTAGCCGAAGCCATTCGTTCTTTATCACCTAGTCCTGAAAAAGCTGCTGCTTCTGAGAATGAGAACAATTTTATTGAGATTATCCTTACAAGGTTATTGGTCAGACCAGATGCTGCACCTCTGTTCTCAGAATTGGTCCATCTTTTTGGGAGGTCGCTAGAGGATTCGATGTTGTTGCAGGCTAAATGGTTCCTAGGTGGACATGATGTTCTCTTTGGACGGAAAACCATTAGACAGCGTCTTGTTAATATTGCTGAGAGTAAAGGCCTTTCAACTAAGGCCCAGTTTTGGAAGCCTTGGGGCTGGGTTAATTCTGGTTTTGGTCCTGGTTTAAACAGGGGAGATAAGAAGAAGCTGGAAGCTACCTCTCTTGAAGAAGGAGAAGTGGTGGAAGAAGGCATTGACTCAAAACGACATGGGAAAGGGTCCAATCCATTATTTGATGCTGAAGGCACCAGCATCGGCCAGCAGCACGTGACTGAGAGGGCATTCATTGAGTTGGTTCTTCCATGCATAGATCAGAGCTCTGATGACTCACGCAATACCTTTGCAAATGATTTGATCAAGCAGTTGAATAACATTGAGCAGCAGATTAGTGCTGTTACTCGTGGAGCAAATAAGCTGACAGGATCAGTTCCTTCTGGAATTGAAGTTCCTTCAAATAAAGGCAGTAATCGCAAAAGTATAAGAGGTGGAAGCCCTGGATTGGCCAGACGACTAGCTGCTACAGCTGATCCTGCACCACCCTCCCCTGCTGCTTTGCGAGCATCTATGTCACTGCGTTTGCAGTTTCTTCTGAGATTGCTGCCTCTCATCTATACGGACGGGGAGCCATCTGGCCGAAACATGAGGTACTTGCTTGCCTCTGTAATTCTCCGTCTACTTGGGAGTCGGGTTGTTCATGAGGATGCAGACCTCTCCTTTTATCCCATGCAGAGCCCTCAGTCAAAGAGAGAGGTGGAGTCACTGCCTGAGGCTTCTTCTGTACCTTCCGCAGATTTTTCTGGGGAAAGTCTTTTTGATCGGTTATTGTTGGTCCTCTATGGCTTGTTGAGTAGTTGCCAGCCAAGTTGGTTGCGGCCAAAGCCGGCCTTCAAGTCTAGCAACAACACATCGAAGGACTCTTCTGGGTTTGATCGTGAGATAGCAGAGAGTTTGCAGAATGACTTAGATCACATGCAACTACCTGACACTGTTAGATGGCGTATCCAAGCTGCCATACCTATATTATTACCTTCTGTGCGATGCTCTCTCACTTGCCAGCCACCATCTGTCCCAGTGGCTGCACTTGCATCACTTCAACCTAGCATCTCAGTTTCTGGGGCATCCCCTGGAAATCTAAACCTACCTCAGAGAAATCCAGTTCCTTTGGCACGATCCGCGACCAACACAGGGAAGTCCAAGCCAATTCCATTGCAGCAGGATAGTGATATGGAGATAGACCCATGGACACTCTTGGAAGATGGTGCAGGATCAGGCCCATCTTCGAGTAATACTGCAGCCATAGGCAGTGGTGACCAAGCTAATCTTCAAGCTGCCAGCTGGCTTAAAGGGGCCATAAGGGTGAGGCGCACAGACCTCACATACATTGGTGCTGTGGATGATGATAGTTGA
Protein:  
MQRYHPTSCTSAVNNSAISGTSARDATRADSSSLPANFSINSRRSTQLTPYKLKCDKESLNSRLGPPDFHPQTPNCPEETLTREYVQNGYKETVEGLEEVREISLTQAQTFNKPVVLKCREAIRKCLRAINESRAQKRKAGQVYGVPLSDSLLTKPGVFPEQRPCGEEFRKKWIEGLSQQHKRLRSLADHVPHGYRKRSLFEVLIRNNVPLLRATWFIKVTYLNQVRHGSANSLSGAQDKIQLSRTEIWTKDVIDYLQHLLDEFFSRNNSHSTQYSRDRSPQTLYTGSPQQRSDPAAVINSEEPSLHFKWWYMVRLVQWHLAEGLLLPSYIIEWVLNQLKDKELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIREPSPGGSDLVDNSRRAYTISALAEMLRYLILAVPDTFVALDCFPLPSCVVSYAANDGNFVSKASEDVGKMKNYSTDAICVFRGKAVDAQYQSLSFDNVISAIQRRADNLAKDASPGYPGHSVAKAVQALDKALLQGDIREAYKHLFEDLCDAALDESWIAEVSPCLRSSLKWIGTVSLSSVCSVFFICEWATCDFRDFRTVPPHGMKFTGRKDFSQIYVAIRLLKQKIRDLHTPPRRKSESTLGIIDNLAKGSRQRNNYANRNFQGNGYEIKNNANRLDGLRINSSDIFETPGPLHDIIVCWIDQHEIHKREGVKRVQHFIMELVRAGIFYPQAYVRQLMVSGILDMNGLDLNRRRRHHRILKVLPGLFLRVALEEARIAEGSQLSEAIHVYSNERRLVLHELLFDQSIYVNVAAQNQKRHMAGGRDGASPSLADQWKTIQPTTGISSGRSGKSDADIEELKASIAVILQLPSSSATSADSGLDESQGSVKRSLGAVSSKMDLSEGTPGCEDCKRVKRQKLCEDRSSVLQIPSPIHSDDEDLWWVRKGPKPLESYKADPPLKSTKQVSRGRQKTVRRTQSLAQLAAARIEGSQGASTSHVCDNKGSCPHHKTGVEGETLKSMDGVRTACYGDIVSIGKALKKLQYVEKRTVTVWLISIARQHIEEAEKTAAKVGQFNRSFVPVEGRISGRWRLSEDELSAILYFMDVCDDLVSATKFLLWLLPKVLNSPSSTINSGRNILMLSRNAENHACGVGEAFLLSSLRRYENIIIATDLIPEALSATMHRAAQVMASNGRVSGSAAYGYARYLLKKYGNMASVIEWEKNFKATCDKRLLSELESGRSLDGELGLPLGVPAGIEDPDDYLRQKISGGQLSRVGLSMRDVVHRHMEEAFHYFYDKERKLFAAGSPRNPAIDKSDDESQIAQQIIIGLMDCFRQTGGAAQEGDPSLLSSAVSAIVGNVIPTMVKIHDFTAGSNYQNYASTTGSLSFARRILRIYITCLCLLKEALGERQSRVFEIALATEASCALARVFTPGKAARSQFQSSPEAHDPNANMSNDILNSSSKVASGRTSKVTAAISALVVGAVLHGVTSLERMVTVFRLKEGLDVIQFVRSTKSNSNGSARSIGTFKLDNSIEVHVHWFRLLVGNCRTVSDGLVVEFLGEPSIVALSRMQRMLPLSLVFPPAYLIFAFVLWRPFILNNSLAVREDIHQMYQSLTMAINDAIRHLPFRDVCLRDCQGFYNLVTADSTDAEFAAMLELNGLDLQLKSMAFVPLRARLFLNAIIDCKMPSSLFKPEDFNRVSGHTESKSHRAENEAKLLDKLVHVLDSLQPAKFHWQWVELRLLLNEQALIDRLENHEMSLAEAIRSLSPSPEKAAASENENNFIEIILTRLLVRPDAAPLFSELVHLFGRSLEDSMLLQAKWFLGGHDVLFGRKTIRQRLVNIAESKGLSTKAQFWKPWGWVNSGFGPGLNRGDKKKLEATSLEEGEVVEEGIDSKRHGKGSNPLFDAEGTSIGQQHVTERAFIELVLPCIDQSSDDSRNTFANDLIKQLNNIEQQISAVTRGANKLTGSVPSGIEVPSNKGSNRKSIRGGSPGLARRLAATADPAPPSPAALRASMSLRLQFLLRLLPLIYTDGEPSGRNMRYLLASVILRLLGSRVVHEDADLSFYPMQSPQSKREVESLPEASSVPSADFSGESLFDRLLLVLYGLLSSCQPSWLRPKPAFKSSNNTSKDSSGFDREIAESLQNDLDHMQLPDTVRWRIQAAIPILLPSVRCSLTCQPPSVPVAALASLQPSISVSGASPGNLNLPQRNPVPLARSATNTGKSKPIPLQQDSDMEIDPWTLLEDGAGSGPSSSNTAAIGSGDQANLQAASWLKGAIRVRRTDLTYIGAVDDDS